Joseph R. Ecker

Salk Institute for Biological Studies

Public scientific profile · Unclaimed

Built from public scholarly sources. Expertise is inferred by ScienceWe from publications and has not been confirmed by the scientist.

Top expertise

  • Single-cell and spatial transcriptomics

    Strong evidence · 11 supporting papers · latest 2026

  • Plant Molecular Biology Research

    Strong evidence · 3 supporting papers · latest 2026

  • Epigenetics and DNA Methylation

    Strong evidence · 6 supporting papers · latest 2026

  • Retinal Development and Disorders

    Strong evidence · 1 supporting paper · latest 2026

  • Reproductive System and Pregnancy

    Strong evidence · 1 supporting paper · latest 2026

  • Tryptophan and brain disorders

    Strong evidence · 1 supporting paper · latest 2026

  • Neuroendocrine regulation and behavior

    Strong evidence · 1 supporting paper · latest 2026

  • Cell Image Analysis Techniques

    Strong evidence · 5 supporting papers · latest 2026

Publications (15)

  • Single-cell analysis of the epigenome and 3D chromatin architecture in the human retina

    2026DOIPMID 39764062

  • Maternal immune activation disrupts epigenomic and functional maturation of cortical excitatory neurons

    2026DOIPMID 42255505

  • Epigenetic and 3D genome reprogramming during the aging of the human hippocampus

    2026DOIPMID 39463924

  • A Community Standard Multispecies Cell Atlas of the Basal Ganglia

    2026DOIPMID 42039530

  • Probabilistic modelling of single-cell bisulfite sequencing data with MethylVI

    2026DOI

  • Transient cell states encode positional information to direct asymmetric growth

    2026DOIPMID 42239415

  • Genome-scale functional mapping of the mammalian whole brain with in vivo Perturb-seq

    2026DOIPMID 42039528

  • Cell-type-specific transposon demethylation and TAD remodeling in aging mouse brain

    2026DOIPMID 41819104

  • Stress drives plasticity in leaf ageing transcriptional dynamics in Arabidopsis thaliana

    2026DOIPMID 41857406

  • Human body single-cell atlas of three-dimensional genome organization and DNA methylation

    2026DOIPMID 42490476

  • Precision-Based Filtering Facilitates Cross-Referencing of Conventional and Single-Nucleus Transcriptomes to Identify Time- and Temperature-Sensitive Cell Populations

    2026DOIPMID 42742261

  • Single-cell epigenomics uncovers heterochromatin instability and transcription factor dysfunction during mouse brain aging

    2026DOIPMID 41824460

  • Scalable longitudinal imaging and transcriptomics of cells in dynamic enclosures

    2026DOIPMID 42146668

  • Abstract 6799: Dissecting the epigenetic inter- and intra-tumor heterogeneity of glioma at single-cell resolution

    2026DOI

  • Macrophage-mediated brain-bone marrow crosstalk promotes chronic stress-induced glioma growth

    2026DOIPMID 42314665

Organizations in sourced records

Affiliation evidence only — not confirmed current employment.

  • Salk Institute for Biological Studies

Source: OpenAlex · retrieved 2026-09-29

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